Publications & Results

Scientific publications

STAMP: Single-cell transcriptomics analysis and multimodal profiling through imaging

Author: Emanuele Pitino, Anna Pascual-Reguant, Felipe Segato-Dezem, Kellie Wise, Irepan Salvador-Martinez, Helena Lucia Crowell, Maycon Marção, Max Ruiz, Elise Courtois, William F Flynn, Santhosh Sivajothi, Emily Soja, Ginevra Caratù, German Atzin Mora-Roldan, B Kate Dredge, Yutian Liu, Hannah Chasteen, Monika Mohenska, Juan C Nieto, Raymond K H Yip, Ruvimbo D Mishi, José M Polo, Mohmed Abdalfttah, Adrienne E Sullivan, Jasmine T Plummer, Holger Heyn, Luciano G Martelotto

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Abstract Publications

DoCTIS: a single cell RNA-seq atlas of drug response to targeted therapies in immune-mediated inflammatory diseases

Author: Siegmund B, Julia A, Guillén Y, Domenech Morral E, Gisbert J, Vela Casasempere P, Fernandez Nebro A, Marras C, Castaneda S, Calvo Alen J, Tornero Molino J, Canete Crespillo J, Carrascosa J M, Fonseca E, Bujunda Fernandez de Pierola L, García V, Girolomoni G, Heyn H, SantaMaria P, Martinez Mateu S H, Myers R, Patino Galindo J A, Choy E, Marsal S

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Scientific publications

Mechanistic and therapeutic advances in immune-mediated gastrointestinal disorders

Author: Nahir Garabatos, Edgar Angelats, Pere Santamaria

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Public deliverables

Deliverable 8.1 – Midterm recruitment report

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Scientific publications

In Situ Inference of Copy Number Variations in Image-Based Spatial Transcriptomics (Preprint)

Author: Augusta Jensen, Helena L. Crowell, Anna Pascual Reguant, Irene Ruano, Sabine Tejpar, Holger Heyn, Mats Nilsson, Sergio Marco Salas

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Scientific publications

Gender perspective in the management of psoriasis

Author: Martina MAURELLI, Paolo GISONDI, Giampiero GIROLOMONI

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Oral Presentations

OP0260 DoCTIS: A SINGLE CELL RNA-Seq ATLAS OF DRUG RESPONSE TO TARGETED THERAPIES

Author: A. Julià, Y. Guillén, J.A. Patiño Galindo, S.H. Martínez-Mateu, P. Vela Casasempere, A. Fernández Nebro, C. Marras, S. Castañeda, J. Calvo Alén, J. Tornero Molina, J.D.D. Cañete Crespillo, E. Domènech, J.P. Gisbert, J.M. Carrascosa, E. Fonseca, L. Bujanda Fernández de Pierola, V. García Sánchez, B. Siegmund, G. Girolomoni, H. Heyn, S. Marsal.

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Abstract Publications

ABS0280 UNVEILING SYNERGISTIC DRUG COMBINATIONS FOR IMMUNE-MEDIATED INFLAMMATORY DISEASES: INSIGHTS FROM THE DoCTIS CONSORTIUM USING SYSTEMS BIOLOGY APPROACHES

Author: A. Julià, E. Choy, M.A. López Lasanta, P. Vela Casasempere, A. Fernández Nebro, S. Castañeda, C. Marras, J. Calvo Alén, J. Tornero Molina, J.D.D. Cañete Crespillo, E. Domènech, J.P. Gisbert, J.M. Carrascosa, E. Fonseca, L. Bujanda Fernández de Pierola, V. García Sánchez, B. Siegmund, G. Girolomoni, H. Heyn, L. Jimenez, S. Marsal.

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Conference Papers

Exploring Query-to-reference Mapping Challenges for Automated Single-Cell Atlas-based Diagnostics

Author: Craighero, Francesco - Maspero, Davide - Jiménez-Gracia, Laura - Aguilar-Fernández, Sergio - Boulougouri, Maria - Nieto, Juan - Heyn, Holger

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Press Releases

DocTIS, in the final stretch to revolutionize the treatment of immune-mediated inflammatory diseases

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The DoCTIS project has received funding from the European Union’s H2020 research and innovation program under grant agreement 848028.